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Archer™ VARIANTPlex™ Lymphoma panel

Discover lymphoma insights with a targeted DNA panel

Detect single nucleotide variants, insertions, deletions, and copy number variations with targeted NGS of 49 genes relevant for B-cell and T-cell lymphoma research.

Detect confidently with Archer NGS Panels for DNA.

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Learn how the VARIANTPlex Lymphoma panel can identify key genomic alterations for your research.

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Product details

Panel specifications

Specifications
Targeted genes49
Genomic alterationsSNVs, Indels, CNVs
Input nucleic acid required*≥10 ng
Recommended number of reads5 M
Hands-on time<3.5 hours
Total library prep time1.5 days
Platform compatibilityIllumina®
Reagent formatLyophilized or liquid
Supported sample typesBlood, bone marrow, fresh frozen, BMMC, PBMC, FFPE

*Input mass requirements vary depending on type and quality. Unless the tumor cellularity and sample quality are high, 50 ng of FFPE-derived nucleic acid should be considered the minimum recommendation. If input is not limiting, 200 ng is recommended.

Gene targets

ARID1A
ATM
B2M
BCL2
BIRC3
BRAF
BTK
CARD11
CCND1
CD28
CD79A
CD79B
CDKN2A
CDKN2B
CREBBP
CXCR4
DNMT3A
EP300
EZH2
FOXO1
ID3
IDH2
JAK1
JAK3
KLF2
KMT2D
MEF2B
MYC
MYD88
NFKBIE
NOTCH1
NOTCH2
PIM1
PLCG1
PLCG2
PTPRD
RHOA
SF3B1
SOCS1
STAT3
STAT5B
STAT6
TCF3
TET2
TNFAIP3
TNFRSF14
TP53
TRAF2
XPO1

Interested in adding a few genes to this panel?

Customize this NGS panel by adding any of our functionally-tested designs or create a new panel that fits your exact requirements with Assay Marketplace.

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Benefits

  • Customizable content—Combine pre-designed panels, create, and easily add targets to your existing assay with Assay Marketplace, or work directly with a design expert.
  • Detect confidentlyAnchored Multiplex PCR (AMP™) chemistry is designed for compatibility with a wide range of sample types, including low-input and potentially degraded samples such as FFPE tissue. Archer Analysis includes a unique outlier detection algorithm that leverages position-specific data to enable variant detection even at low allele frequencies, empowering you to detect confidently.
  • Achieve efficiency—Streamlined workflows for your lab are enabled by your choice of reaction-sized lyophilized reagents or high-throughput liquid reagents, while parallel workflows across all Archer panels provide efficient genomic characterization.

Ready to start?

Talk with our technical sales team. Learn how the VARIANTPlex Lymphoma panel can identify key genomic alterations for your research.

Request a consultation

Related products

References

RUO24-2989_001

Frequently asked questions